BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D10LP1|AL426363
(824 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1587 0.0
>3x_Contig1800
Length = 38778
Score = 1587 bits (800), Expect = 0.0
Identities = 822/826 (99%), Gaps = 3/826 (0%)
Strand = Plus / Plus
Query: 1 gatcgtactccgatatcgagaacttcaaacccccacaaaaaatcgttagagggctaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28294 gatcgtactccgatatcgagaacttcaaacccccacaaaaaatcgttagagggctaaaaa 28353
Query: 61 caagacatatccaattgattgctttaggtagtgcaatcggtactggtttattcatcggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28354 caagacatatccaattgattgctttaggtagtgcaatcggtactggtttattcatcggtt 28413
Query: 121 ctggtggtgccttgagtgtctgtggaccggcaccattacttattgcttatattatcattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28414 ctggtggtgccttgagtgtctgtggaccggcaccattacttattgcttatattatcattt 28473
Query: 181 ccttctttgtttggagtatcatgaaccaaatgaccgagatggtttgtttgattccacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28474 ccttctttgtttggagtatcatgaaccaaatgaccgagatggtttgtttgattccacttc 28533
Query: 241 ctggtgaagcgtccttgtactcgttggctaagacctatttgaattctccaatatcattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28534 ctggtgaagcgtccttgtactcgttggctaagacctatttgaattctccaatatcattta 28593
Query: 301 tgtgtggttggaatctattttatgccatggccatgattgtaccagccgaaattactgctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28594 tgtgtggttggaatctattttatgccatggccatgattgtaccagccgaaattactgctt 28653
Query: 361 gtgcattgttagttcaatattggaccgatgctaactccgccatcttcatctccatattta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28654 gtgcattgttagttcaatattggaccgatgctaactccgccatcttcatctccatattta 28713
Query: 421 tcgttgtttctattcttctaacaatgctgccagtgaaggtgtttggtgaatctgagttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28714 tcgttgtttctattcttctaacaatgctgccagtgaaggtgtttggtgaatctgagttct 28773
Query: 481 gggtttcatctatcaagatcttaaccatcgttggtcttatcattgttggtattgtcattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28774 gggtttcatctatcaagatcttaaccatcgttggtcttatcattgttggtattgtcattt 28833
Query: 541 tcttcggtggtggtccagcccaagaccacgtcttgggtttccactattggragaacccag 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 28834 tcttcggtggtggtccagcccaagaccacgtcttgggtttccactattggaagaacccag 28893
Query: 601 gtgctttcaacccacatttggctgaggggaatacgggtagatttttggccgtttggactg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28894 gtgctttcaacccacatttggctgaggggaatacgggtagatttttggccgtttggactg 28953
Query: 661 ctattatcaagagtgggttctcgttcgttttggttccagagacagtgacttcgtgttccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28954 ctattatcaagagtgggttctcgttcgttttggttccagagacagtgacttcgtgttccg 29013
Query: 721 cagaatgtatcgcaccaagaagga-acatgccaaagg-atgtcaaaagatttatttaccg 778
|||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||
Sbjct: 29014 cagaatgtatcgcaccaagaaggagacatgccaaaggcatgtc-aaagatttatttaccg 29072
Query: 779 tttggctatcttctacattgtaggcacattagtcgttggtgtgatc 824
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29073 tttggctatcttctacattgtaggcacattagtcgttggtgtgatc 29118
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5894
Number of Sequences: 1807
Number of extensions: 5894
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 824
length of database: 10,358,551
effective HSP length: 16
effective length of query: 808
effective length of database: 10,329,639
effective search space: 8346348312
effective search space used: 8346348312
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)